Dynamic PDB
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Rerefined model

PDB 2EKQ|dpdb_01ec39by

Chain2-deoxy-D-gluconate 3-dehydrogenaseThermus thermophilus HB8239 residues
120406080100120140160180200220239
Chain A
Backbone spread · reading 3

Similar proteins

ProteinIdentityCoverageE-valueMatched region
PDB 2EKP | dpdb_hlkig8ypThermus thermophilus · 1 chain matched
100%100%2e-1521–239
PDB 4JP2 | dpdb_lkvosxsuThermus thermophilus · 1 chain matched
100%100%2e-1521–239
PDB 1X1E | dpdb_nyw0o5qsThermus thermophilus · 1 chain matched
100%100%2e-1521–239
PDB 4JP3 | dpdb_wfxy8tk8Thermus thermophilus · 1 chain matched
100%100%2e-1521–239
PDB 2PH3 | dpdb_8s9j4vghThermus thermophilus HB8 · 1 chain matched
40.9%97.5%1e-373–235
PDB 4HP8 | dpdb_f9rz15e3Agrobacterium tumefaciens · 1 chain matched
37.7%98.7%1e-343–238
PDB 6T77 | dpdb_v9qhmyw3Klebsiella pneumoniae · 1 chain matched
37.5%96.7%9e-325–235
PDB 1UAY | dpdb_gawx0s8yThermus thermophilus · 1 chain matched
36.5%97.9%1e-171–234
PDB 2D1Y | dpdb_26mseslkThermus thermophilus · 1 chain matched
37.8%97.5%2e-316–238
PDB 2WSB | dpdb_q82fh8c2RHODOBACTER SPHAEROIDES · 1 chain matched
36.9%98.3%5e-365–239
PDB 2WDZ | dpdb_rppfpeduRHODOBACTER SPHAEROIDES · 1 chain matched
36.9%98.3%5e-365–239
PDB 6T5X | dpdb_xzd7q3pqSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) · 1 chain matched
36.6%96.7%8e-315–235
PDB 4YQZ | dpdb_720cusfwThermus thermophilus · 1 chain matched
38.8%97.5%2e-293–235
PDB 2P68 | dpdb_6mofizjbAquifex aeolicus · 1 chain matched
35.8%96.2%1e-336–235
PDB 2PNF | dpdb_yoelar6uAquifex aeolicus · 1 chain matched
35.8%96.2%1e-336–235
PDB 8BCI | dpdb_e444t9pfPseudomonas aeruginosa PAO1 · 1 chain matched
33.4%98.3%2e-201–235
PDB 8BCJ | dpdb_vhvjz258Pseudomonas aeruginosa PAO1 · 1 chain matched
33.4%98.3%2e-201–235
PDB 3WDS | dpdb_yifad6asAgrobacterium tumefaciens · 1 chain matched
34.9%97.5%7e-283–235
PDB 2NM0 | dpdb_a4pghxylStreptomyces coelicolor · 1 chain matched
36.1%98.3%3e-291–235
PDB 4WEO | dpdb_86bh5ohyBurkholderia cenocepacia · 1 chain matched
35.3%97.1%1e-255–236
PDB 3OP4 | dpdb_ji3n8kmjVibrio cholerae O1 biovar El Tor · 1 chain matched
34.5%96.7%3e-305–235
PDB 2AE2 | dpdb_15nsdbrkDatura stramonium · 1 chain matched
34.4%97.9%2e-265–238
PDB 3TZK | dpdb_gd8cu21aVibrio cholerae · 1 chain matched
34.9%96.7%8e-315–235
PDB 3OSU | dpdb_ueb745urStaphylococcus aureus subsp. aureus Mu50 · 1 chain matched
33%98.3%9e-301–235
PDB 6T6P | dpdb_tm3d36slKlebsiella pneumoniae 30684/NJST258_2 · 1 chain matched
33.3%98.3%2e-293–237
PDB 3WYE | dpdb_lp8ntgn7Klebsiella pneumoniae · 1 chain matched
32.5%99.2%9e-281–237
PDB 1GEG | dpdb_xbd0w3abKlebsiella pneumoniae · 1 chain matched
32.5%99.2%1e-231–237
PDB 7KRK | dpdb_qwiymoinAcinetobacter baumannii · 1 chain matched
33.3%98.3%6e-295–239
PDB 7KRM | dpdb_sklxz033Acinetobacter baumannii · 1 chain matched
33.3%98.3%6e-295–239
PDB 3U09 | dpdb_ed26q4wvVibrio cholerae · 1 chain matched
34.5%96.7%5e-305–235
PDB 3RSH | dpdb_vsz3cn6xVibrio cholerae O1 biovar El Tor · 1 chain matched
34.5%96.7%3e-305–235
PDB 5FF9 | dpdb_rerv325aNarcissus pseudonarcissus · 1 chain matched
34.4%96.7%8e-295–235
PDB 5FFF | dpdb_zxtgfj98Narcissus pseudonarcissus · 1 chain matched
34.4%96.7%8e-295–235
PDB 6T62 | dpdb_6mb1r5g6Acinetobacter baumannii · 1 chain matched
32.9%97.9%7e-262–235
PDB 7CAZ | dpdb_9rxl2nxkAcinetobacter baumannii · 1 chain matched
32.9%97.9%7e-262–235
PDB 6WPR | dpdb_be1un5w4Acinetobacter baumannii · 1 chain matched
32.9%97.9%7e-262–235
PDB 6T60 | dpdb_d4uq1l6bAcinetobacter baumannii · 1 chain matched
32.9%97.9%7e-262–235
PDB 3PK0 | dpdb_u4wxqi6pMycobacterium smegmatis · 1 chain matched
34.8%97.5%1e-243–235
PDB 8HS6 | dpdb_04md8aflBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) · 1 chain matched
33.6%96.7%5e-245–235
PDB 7CAW | dpdb_6ibbvum3Acinetobacter baumannii · 1 chain matched
32.1%99.2%1e-221–237
PDB 7CAX | dpdb_xmgykgl3Acinetobacter baumannii · 1 chain matched
32.1%99.2%1e-221–237
PDB 7DJS | dpdb_seofqq4nPseudomonas aeruginosa · 1 chain matched
34.2%97.9%7e-265–238
PDB 3O4R | dpdb_rnshquu0Homo sapiens · 1 chain matched
34.7%96.7%9e-305–235
PDB 3IMF | dpdb_dn7ji0d9Bacillus anthracis str. 'Ames Ancestor' · 1 chain matched
33.3%97.9%4e-262–235
PDB 5ITW | dpdb_prfy7rgcBacillus subtilis (strain 168) · 1 chain matched
32.4%99.2%2e-282–238
PDB 8HDI | dpdb_muc7m4h5Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) · 1 chain matched
33.6%96.7%3e-245–235
PDB 1NFF | dpdb_vwcwvhcyMycobacterium tuberculosis · 1 chain matched
35.4%97.9%4e-265–238
PDB 1AE1 | dpdb_d70pddogDatura stramonium · 1 chain matched
34.8%97.9%8e-315–238
PDB 4CR6 | dpdb_nenrixt0FLAVOBACTERIUM SP. 141-8 · 1 chain matched
34.4%98.7%4e-273–238
PDB 7V1Q | dpdb_n2mprx47Leifsonia antarctica · 1 chain matched
32.1%99.2%2e-222–238
PDB 8HDN | dpdb_jldnmvylBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) · 1 chain matched
33.1%96.7%7e-245–235
PDB 4ZA2 | dpdb_vuadpjdjPectobacterium carotovorum subsp. carotovorum · 1 chain matched
32.6%97.9%4e-345–238
PDB 4Z9Y | dpdb_xz44od2fPectobacterium carotovorum subsp. carotovorum · 1 chain matched
32.6%97.9%4e-345–238
PDB 8KCN | dpdb_fwqk6yuvLactobacillaceae · 1 chain matched
31.8%97.9%2e-235–238
PDB 2HQ1 | dpdb_wso7qf5kClostridium thermocellum · 1 chain matched
31.4%98.3%7e-283–237
PDB 6XNB | dpdb_u79u445oLeifsonia xyli · 1 chain matched
31.7%98.7%1e-213–238
PDB 2Z1N | dpdb_968mg74aAeropyrum pernix · 1 chain matched
32%96.7%4e-245–235
PDB 4K6F | dpdb_7dqmn960Burkholderia cenocepacia · 1 chain matched
32.3%97.9%2e-272–235
PDB 4K6C | dpdb_jg2otc09Burkholderia cenocepacia · 1 chain matched
32.3%97.9%2e-272–235
PDB 7EJJ | dpdb_szid3x4zLactobacillus kefiri · 1 chain matched
31.5%97.9%1e-215–238
PDB 4JIG | dpdb_5jb23r6aBurkholderia cenocepacia · 1 chain matched
32.2%97.9%6e-172–235
PDB 5JY1 | dpdb_f0pnvhxmBurkholderia xenovorans (strain LB400) · 1 chain matched
34.2%97.9%1e-222–235
PDB 6B9U | dpdb_9lqopfvnBrucella abortus · 1 chain matched
32.2%96.7%9e-215–235
PDB 7VDO | dpdb_q3l6n2ecLactobacillus kefiri · 1 chain matched
31.5%97.9%1e-215–238
PDB 4ITU | dpdb_36ins8w5Xanthobacter autotrophicus · 1 chain matched
33.4%97.1%3e-247–238
PDB 3W8E | dpdb_3qaz76ahAlcaligenes faecalis · 1 chain matched
30.7%98.7%4e-243–238
PDB 5B4V | dpdb_9216saogAlcaligenes faecalis · 1 chain matched
30.7%98.7%4e-243–238
PDB 3W8D | dpdb_lerusmz7Alcaligenes faecalis · 1 chain matched
30.7%98.7%4e-243–238
PDB 3W8F | dpdb_p51jedhrAlcaligenes faecalis · 1 chain matched
30.7%98.7%4e-243–238
PDB 2YZ7 | dpdb_rns9ctn6Alcaligenes faecalis · 1 chain matched
30.7%98.7%4e-243–238
PDB 5B4U | dpdb_ry0ojwbnAlcaligenes faecalis · 1 chain matched
30.7%98.7%4e-243–238
PDB 5B4T | dpdb_wikrr61lAlcaligenes faecalis · 1 chain matched
30.7%98.7%4e-243–238
PDB 7NM8 | dpdb_nourxoz0Streptomyces albus · 1 chain matched
35.3%97.5%1e-263–235
PDB 6ZZQ | dpdb_wnukwyptAcinetobacter baumannii · 1 chain matched
31.2%97.9%8e-225–238
PDB 5TS3 | dpdb_gnsj5eowBrucella melitensis biotype 2 (strain ATCC 23457) · 1 chain matched
33.7%97.9%1e-232–235
PDB 4NBR | dpdb_sii8dc5oBrucella abortus bv. 1 · 1 chain matched
33.7%97.9%1e-232–235
PDB 5MLN | dpdb_jtyrbcvnCandida magnoliae · 1 chain matched
30.7%97.9%8e-205–238
PDB 4YQY | dpdb_2p9ikxndSulfitobacter sp. NAS-14.1 · 1 chain matched
33.4%98.3%5e-253–237
PDB 7DO7 | dpdb_x7uxvyw9Azotobacter vinelandii (strain DJ / ATCC BAA-1303) · 1 chain matched
32.2%98.3%2e-241–235
PDB 7EJI | dpdb_1k5r4hzfLactobacillus kefiri · 1 chain matched
31.1%97.9%3e-215–238
PDB 7EJH | dpdb_btlt1nrzLactobacillus kefiri · 1 chain matched
31.1%97.9%3e-215–238
PDB 7VE7 | dpdb_qi487db7Lactobacillus kefiri · 1 chain matched
31.1%97.9%3e-215–238
PDB 5OVJ | dpdb_agqdcfwbMycobacterium smegmatis (strain ATCC 700084 / mc(2)155) · 1 chain matched
33.1%98.3%8e-271–235
PDB 5OVK | dpdb_joopw6xfMycobacterium smegmatis (strain ATCC 700084 / mc(2)155) · 1 chain matched
33.1%98.3%8e-271–235
PDB 7P36 | dpdb_m5lnzpl1Lactobacillus kefiri · 1 chain matched
31.8%97.9%2e-235–238
PDB 7P7Y | dpdb_mritxp45Lactobacillus kefiri · 1 chain matched
31.8%97.9%2e-235–238
PDB 4NI5 | dpdb_v5i9wxzrBrucella suis · 1 chain matched
31.1%99.2%1e-252–238
PDB 3R1I | dpdb_ql89r5p1Mycobacterium marinum · 1 chain matched
33.8%97.9%2e-313–236
PDB 5X8H | dpdb_8xd7fc8bChryseobacterium sp. CA49 · 1 chain matched
30.6%97.9%2e-245–238
PDB 1ZJY | dpdb_csqkfhsyLactobacillus brevis · 1 chain matched
30.6%97.9%2e-205–238
PDB 7A2B | dpdb_cvg1yrkcLactobacillus brevis · 1 chain matched
30.6%97.9%2e-205–238
PDB 1ZK4 | dpdb_gtjcbqvjLactobacillus brevis · 1 chain matched
30.6%97.9%2e-205–238
PDB 6IXM | dpdb_h71u9zh3Chryseobacterium sp. CA49 · 1 chain matched
30.6%97.9%2e-245–238
PDB 1ZK0 | dpdb_lru41so8Lactobacillus brevis · 1 chain matched
30.6%97.9%2e-205–238
PDB 1NXQ | dpdb_tacpoochLactobacillus brevis · 1 chain matched
30.6%97.9%2e-205–238
PDB 1ZK2 | dpdb_whwrif1mLactobacillus brevis · 1 chain matched
30.6%97.9%2e-205–238
PDB 4NPC | dpdb_bquz7vepBrucella suis · 1 chain matched
32.7%98.3%2e-262–236
PDB 6NRP | dpdb_xg0bgkqnAcinetobacter baumannii · 1 chain matched
32.1%99.2%1e-221–237
PDB 1UZN | dpdb_7ag7s92bMYCOBACTERIUM TUBERCULOSIS · 1 chain matched
31.7%98.3%2e-271–235
PDB 1UZM | dpdb_rs4d5l8eMYCOBACTERIUM TUBERCULOSIS · 1 chain matched
31.7%98.3%2e-271–235