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Ensemble refinement model

PDB 5B41|dpdb_11iqz4pa

Ensemble refinement model

Crystal structure of VDR-LBD complexed with 2-methylidene-19-nor-1a,25-dihydroxyvitamin D3

Program
PHENIX phenix.ensemble_refinement
Model type
Ensemble
Purpose
Refinement
Atoms
105,885
Residues
250
Protein chains
2
Alternate-location fraction
0%
Ligand
YSV

Evaluations

R-work
0.168
R-free
0.210
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Vitamin D3 receptor271
  • ConstructUNP RESIDUES 116-164, 212-423
  • Mutations165-211 deletion
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Mediator of RNA polymerase II transcription subunit 113
  • ConstructUNP residues 640-652

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations