Ensemble refinement model

PDB 4RZ8|dpdb_1x810dn7

Ensemble refinement model

Crystal structure of HIV-1 gp120 core in complex with NBD-11021, a small molecule CD4-antagonist

Program
PHENIX 2.0_5824
Model type
Ensemble
Purpose
Refinement
Atoms
466,403
Residues
1,351
Protein chains
4
Alternate-location fraction
0%
Ligands
3ZM, EPE, NAG

Evaluations

R-work
0.246
R-free
0.296
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Envelope glycoprotein gp120353
  • Human immunodeficiency virus 111676
  • Human immunodeficiency virus 111676
  • Human immunodeficiency virus 111676
  • ConstructUNP residues 43-122, 201-303, 325-486
  • MutationsV1V2 and V3 deletion, H375S

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations