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Ensemble refinement model

PDB 6XVB|dpdb_5g4iy6mg

Ensemble refinement model

Crystal structure of the kinase domain of human c-KIT with a cyclic imidate inhibitor covalently bound to Cys788

Program
PHENIX phenix.ensemble_refinement
Model type
Ensemble
Purpose
Refinement
Atoms
194,596
Residues
585
Protein chains
2
Alternate-location fraction
0%
Ligand
O2H

Evaluations

R-work
0.178
R-free
0.224
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Mast/stem cell growth factor receptor Kit,Mast/stem cell growth factor receptor Kit328
  • Constructprotein kinase domain (551-934 del[688-755]),protein kinase domain (551-934 del[688-755])
  • MutationsI563S V569S Y609Q L631S M651E I662H D768H R804N V825D C844S L890S H894Y L912D L923D

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations