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Ensemble refinement model

PDB 3ECB|dpdb_6m4zq4sp

Ensemble refinement model

Crystal structure of mouse H-2Dd in complex with peptide P18-I10 derived from human immunodeficiency virus envelope glycoprotein 120

Program
PHENIX 1.21.2_5419
Model type
Ensemble
Purpose
Refinement
Atoms
226,380
Residues
382
Protein chains
3
Alternate-location fraction
0%
Ligands
EDO, MG

Evaluations

R-work
0.179
R-free
0.211
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
H-2 class I histocompatibility antigen, D-D alpha chain277
  • ConstructUNP residues 26 to 298
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Beta-2 microglobulin100
  • ConstructUNP residues 21 to 119
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Peptide P18-I10 from HIV gp16010
  • Human immunodeficiency virus type 1 group M subtype B (isolate MFA)11704
  • ConstructUNP residues 309 to 318

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations