Deposited model

PDB 4UFD|dpdb_73ksrnol

Deposited model

Thrombin in complex with 4-(((1-((2S)-1-((2R)-2-(benzylsulfonylamino)- 3-phenyl-propanoyl)pyrrolidin-2-yl)-1-oxo-ethyl)amino)methyl) benzamidine

Program
PHENIX (PHENIX.REFINE)
Model type
Deposited
Purpose
Reference
Authors
Ruehmann, E., Heine, A., Klebe, G.
Atoms
2,720
Residues
282
Protein chains
3
Unmodeled fraction
5.69%
Ligands
NA, NAG

Evaluations

R-work
0.134
R-free
0.159
Clashscore
2.9

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
THROMBIN HEAVY CHAIN258
  • ConstructRESIDUES 364-621
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
HIRUDIN VARIANT-212
  • Hirudo medicinalis6421
  • ConstructRESIDUES 61-72
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
THROMBIN LIGHT CHAIN29
  • ConstructRESIDUES 333-361

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations