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qFit model

PDB 4F56|dpdb_ano6naac

qFit model

The bicyclic intermediate structure provides insights into the desuccinylation mechanism of SIRT5

Program
Phenix 2.0_5824
Model type
Multiconformer
Purpose
Model Building
Atoms
7,267
Residues
553
Protein chains
4
Alternate-location fraction
47.2%
Ligands
CGK, ZN

Evaluations

R-work
0.183
R-free
0.230
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
NAD-dependent lysine demalonylase and desuccinylase sirtuin-5, mitochondrial273
  • ConstructUNP Residue 34-302
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
peptide from Histone H3.112
  • ConstructUNP residue 5-16

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations