Ensemble refinement model

PDB 6YHG|dpdb_bg5rmgoe

Ensemble refinement model

Thrombin in complex with D-Phe-Pro-m-methoxybenzylamide derivative (16a)

Program
PHENIX 1.21.2_5419
Model type
Ensemble
Purpose
Refinement
Atoms
266,680
Residues
294
Protein chains
3
Alternate-location fraction
0%
Ligands
DPN, GOL, NA, NAG, PO4, SZ4, TYS

Evaluations

R-work
0.164
R-free
0.189
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Prothrombin36—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Prothrombin259—
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Hirudin variant-212
  • Hirudo medicinalis6421
—

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations