Dynamic PDB
Log in

Ensemble refinement model

PDB 5D1M|dpdb_bza3ime5

Ensemble refinement model

Crystal Structure of UbcH5B in Complex with the RING-U5BR Fragment of AO7 (P199A)

Program
PHENIX phenix.ensemble_refinement
Model type
Ensemble
Purpose
Refinement
Atoms
224,653
Residues
256
Protein chains
2
Alternate-location fraction
0%
Ligands
EDO, OXL, PEG, ZN

Evaluations

R-work
0.167
R-free
0.202
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Ubiquitin-conjugating enzyme E2 D2147—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
E3 ubiquitin-protein ligase RNF25133
  • ConstructUNP residues 126-258
  • MutationP199A

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations