Dynamic PDB
Log in

Rerefined model

PDB 4HP8|dpdb_f9rz15e3

Chain2-deoxy-D-gluconate 3-dehydrogenaseAgrobacterium fabrum str. C58247 residues
1255075100125150175200225247
Chain A
Backbone spread · reading 3

Similar proteins

ProteinIdentityCoverageE-valueMatched region
PDB 4ZA2 | dpdb_vuadpjdjPectobacterium carotovorum subsp. carotovorum · 1 chain matched
53.6%99.2%2e-803–247
PDB 4Z9Y | dpdb_xz44od2fPectobacterium carotovorum subsp. carotovorum · 1 chain matched
53.6%99.2%2e-803–247
PDB 4Z9X | dpdb_vmjst58sStreptococcus pyogenes serotype M1 · 1 chain matched
41.3%99.6%1e-431–246
PDB 5U9P | dpdb_f2fai6lpBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) · 1 chain matched
42.7%96.8%8e-455–243
PDB 3W8E | dpdb_3qaz76ahAlcaligenes faecalis · 1 chain matched
40%97.6%4e-417–247
PDB 5B4V | dpdb_9216saogAlcaligenes faecalis · 1 chain matched
40%97.6%4e-417–247
PDB 3W8D | dpdb_lerusmz7Alcaligenes faecalis · 1 chain matched
40%97.6%4e-417–247
PDB 3W8F | dpdb_p51jedhrAlcaligenes faecalis · 1 chain matched
40%97.6%4e-417–247
PDB 2YZ7 | dpdb_rns9ctn6Alcaligenes faecalis · 1 chain matched
40%97.6%4e-417–247
PDB 5B4U | dpdb_ry0ojwbnAlcaligenes faecalis · 1 chain matched
40%97.6%4e-417–247
PDB 5B4T | dpdb_wikrr61lAlcaligenes faecalis · 1 chain matched
40%97.6%4e-417–247
PDB 2WSB | dpdb_q82fh8c2RHODOBACTER SPHAEROIDES · 1 chain matched
40.2%97.2%1e-385–244
PDB 2WDZ | dpdb_rppfpeduRHODOBACTER SPHAEROIDES · 1 chain matched
40.2%97.2%1e-385–244
PDB 3OP4 | dpdb_ji3n8kmjVibrio cholerae O1 biovar El Tor · 1 chain matched
38.8%98.4%5e-411–243
PDB 2PH3 | dpdb_8s9j4vghThermus thermophilus HB8 · 1 chain matched
39.9%94.7%2e-3910–243
PDB 6T6P | dpdb_tm3d36slKlebsiella pneumoniae 30684/NJST258_2 · 1 chain matched
39%96.8%4e-375–243
PDB 3RSH | dpdb_vsz3cn6xVibrio cholerae O1 biovar El Tor · 1 chain matched
38.8%98.4%5e-411–243
PDB 4URF | dpdb_gl8zcckbAROMATOLEUM AROMATICUM EBN1 · 1 chain matched
38.4%97.6%1e-337–247
PDB 4URE | dpdb_on8hz85tAROMATOLEUM AROMATICUM EBN1 · 1 chain matched
38.4%97.6%1e-337–247
PDB 3U09 | dpdb_ed26q4wvVibrio cholerae · 1 chain matched
38.4%98.4%5e-401–243
PDB 3TZK | dpdb_gd8cu21aVibrio cholerae · 1 chain matched
38.4%98.4%3e-401–243
PDB 2HQ1 | dpdb_wso7qf5kClostridium thermocellum · 1 chain matched
38.5%96.8%1e-385–243
PDB 6T5X | dpdb_xzd7q3pqSalmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) · 1 chain matched
38.5%96.8%2e-395–243
PDB 6T77 | dpdb_v9qhmyw3Klebsiella pneumoniae · 1 chain matched
37.8%96.8%4e-375–243
PDB 2P68 | dpdb_6mofizjbAquifex aeolicus · 1 chain matched
37.6%96.8%2e-395–243
PDB 2PNF | dpdb_yoelar6uAquifex aeolicus · 1 chain matched
37.6%96.8%2e-395–243
PDB 3NUG | dpdb_noi67w70Mesorhizobium loti · 1 chain matched
37.9%96%2e-317–243
PDB 2EKQ | dpdb_01ec39byThermus thermophilus · 1 chain matched
37.7%96%1e-3310–246
PDB 2EKP | dpdb_hlkig8ypThermus thermophilus · 1 chain matched
37.7%96%1e-3310–246
PDB 4JP2 | dpdb_lkvosxsuThermus thermophilus · 1 chain matched
37.7%96%1e-3310–246
PDB 1X1E | dpdb_nyw0o5qsThermus thermophilus · 1 chain matched
37.7%96%1e-3310–246
PDB 4JP3 | dpdb_wfxy8tk8Thermus thermophilus · 1 chain matched
37.7%96%1e-3310–246
PDB 2Q2V | dpdb_2azg4ivePseudomonas putida · 1 chain matched
36.3%98%2e-316–247
PDB 3O03 | dpdb_s16qxnfrStreptococcus suis · 1 chain matched
40.7%98%7e-415–246
PDB 8HS6 | dpdb_04md8aflBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) · 1 chain matched
35.4%97.6%2e-253–243
PDB 8HDI | dpdb_muc7m4h5Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) · 1 chain matched
35.4%97.6%1e-253–243
PDB 4WEO | dpdb_86bh5ohyBurkholderia cenocepacia · 1 chain matched
36.3%96.4%5e-317–244
PDB 3WDS | dpdb_yifad6asAgrobacterium tumefaciens · 1 chain matched
35.2%98.4%6e-301–243
PDB 8HDN | dpdb_jldnmvylBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) · 1 chain matched
35%97.6%3e-253–243
PDB 3OSU | dpdb_ueb745urStaphylococcus aureus subsp. aureus Mu50 · 1 chain matched
35.9%94.7%1e-3410–243
PDB 7DJS | dpdb_seofqq4nPseudomonas aeruginosa · 1 chain matched
36.1%96%6e-277–243
PDB 3WYE | dpdb_lp8ntgn7Klebsiella pneumoniae · 1 chain matched
36%93.9%2e-2912–243
PDB 4K6F | dpdb_7dqmn960Burkholderia cenocepacia · 1 chain matched
35.9%94.7%6e-3010–243
PDB 4K6C | dpdb_jg2otc09Burkholderia cenocepacia · 1 chain matched
35.9%94.7%6e-3010–243
PDB 1X1T | dpdb_jq66iehpPseudomonas fragi · 1 chain matched
34.6%97.6%8e-307–247
PDB 4NBV | dpdb_kvkn8qcvCupriavidus taiwanensis · 1 chain matched
34.8%96.8%2e-275–243
PDB 7KRK | dpdb_qwiymoinAcinetobacter baumannii · 1 chain matched
34.7%96.8%1e-287–245
PDB 7KRM | dpdb_sklxz033Acinetobacter baumannii · 1 chain matched
34.7%96.8%1e-287–245
PDB 5HA5 | dpdb_2dejmfdrBrucella ovis IntaBari-2002-82-58 · 1 chain matched
34.5%97.2%2e-267–246
PDB 5ER6 | dpdb_ts2k2szkBrucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) · 1 chain matched
34.5%97.2%2e-267–246
PDB 5VT6 | dpdb_ippcac5fBurkholderia pseudomallei (strain 1710b) · 1 chain matched
36.2%98%6e-322–243
PDB 4BO2 | dpdb_7kmtqskvPSEUDOMONAS AERUGINOSA · 1 chain matched
36.9%96.8%2e-345–243
PDB 4BNY | dpdb_gs5znmvgPSEUDOMONAS AERUGINOSA · 1 chain matched
36.9%96.8%2e-345–243
PDB 4AG3 | dpdb_tq9v1m46PSEUDOMONAS AERUGINOSA · 1 chain matched
36.9%96.8%2e-345–243
PDB 4NPC | dpdb_bquz7vepBrucella suis · 1 chain matched
36.3%97.2%6e-345–244
PDB 6T62 | dpdb_6mb1r5g6Acinetobacter baumannii · 1 chain matched
34.5%95.5%2e-298–243
PDB 7CAZ | dpdb_9rxl2nxkAcinetobacter baumannii · 1 chain matched
34.5%95.5%2e-298–243
PDB 6WPR | dpdb_be1un5w4Acinetobacter baumannii · 1 chain matched
34.5%95.5%2e-298–243
PDB 6T60 | dpdb_d4uq1l6bAcinetobacter baumannii · 1 chain matched
34.5%95.5%2e-298–243
PDB 5T2V | dpdb_slaewdxrMycobacterium smegmatis (strain ATCC 700084 / mc(2)155) · 1 chain matched
34.5%96.8%2e-255–243
PDB 6CI9 | dpdb_qb3dsgy7Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) · 1 chain matched
34.9%96.4%1e-246–243
PDB 2D1Y | dpdb_26mseslkThermus thermophilus · 1 chain matched
34.6%96.4%4e-229–246
PDB 1GEE | dpdb_agwrnoq2Bacillus megaterium · 1 chain matched
34.8%96%3e-287–243
PDB 1GCO | dpdb_qvr2tttkBacillus megaterium · 1 chain matched
34.8%96%3e-287–243
PDB 3ICC | dpdb_33r4j2n5Bacillus anthracis str. 'Ames Ancestor' · 1 chain matched
33.9%96%3e-227–243
PDB 6ZZQ | dpdb_wnukwyptAcinetobacter baumannii · 1 chain matched
33.3%97.6%1e-257–247
PDB 3WTC | dpdb_3gk72jnoGluconobacter oxydans · 1 chain matched
32.9%98.4%6e-285–247
PDB 6CI8 | dpdb_ssm5we3nMycobacterium smegmatis (strain ATCC 700084 / mc(2)155) · 1 chain matched
34.9%96.4%1e-246–243
PDB 2JAH | dpdb_1mb14aqjSTREPTOMYCES CLAVULIGERUS · 1 chain matched
35.4%91.1%1e-194–228
PDB 4NI5 | dpdb_v5i9wxzrBrucella suis · 1 chain matched
34.4%95.1%8e-2713–247
PDB 5U2W | dpdb_fsryz99mBurkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) · 1 chain matched
34.1%96%6e-287–243
PDB 5X8H | dpdb_8xd7fc8bChryseobacterium sp. CA49 · 1 chain matched
33%97.2%2e-277–246
PDB 6IXM | dpdb_h71u9zh3Chryseobacterium sp. CA49 · 1 chain matched
33%97.2%2e-277–246
PDB 3R1I | dpdb_ql89r5p1Mycobacterium marinum · 1 chain matched
36%97.2%2e-325–244
PDB 8BCI | dpdb_e444t9pfPseudomonas aeruginosa PAO1 · 1 chain matched
33.8%93.5%9e-2213–243
PDB 8BCJ | dpdb_vhvjz258Pseudomonas aeruginosa PAO1 · 1 chain matched
33.8%93.5%9e-2213–243
PDB 1IY8 | dpdb_xxstmyqrLeifsonia aquatica · 1 chain matched
33.7%94.7%4e-2410–243
PDB 5OJI | dpdb_2htgic9uCaenorhabditis elegans · 1 chain matched
32.5%97.2%8e-218–247
PDB 5OJG | dpdb_jlyr6xlqCaenorhabditis elegans · 1 chain matched
32.5%97.2%8e-218–247
PDB 3O4R | dpdb_rnshquu0Homo sapiens · 1 chain matched
32.9%97.6%1e-247–247
PDB 5OVJ | dpdb_agqdcfwbMycobacterium smegmatis (strain ATCC 700084 / mc(2)155) · 1 chain matched
35.2%94.7%3e-2810–243
PDB 5OVK | dpdb_joopw6xfMycobacterium smegmatis (strain ATCC 700084 / mc(2)155) · 1 chain matched
35.2%94.7%3e-2810–243
PDB 7DO7 | dpdb_x7uxvyw9Azotobacter vinelandii (strain DJ / ATCC BAA-1303) · 1 chain matched
34.4%93.5%6e-2713–243
PDB 1UZN | dpdb_7ag7s92bMYCOBACTERIUM TUBERCULOSIS · 1 chain matched
32.9%98%1e-242–243
PDB 1UZM | dpdb_rs4d5l8eMYCOBACTERIUM TUBERCULOSIS · 1 chain matched
32.9%98%1e-242–243
PDB 5FF9 | dpdb_rerv325aNarcissus pseudonarcissus · 1 chain matched
31.8%98.4%1e-211–243
PDB 5FFF | dpdb_zxtgfj98Narcissus pseudonarcissus · 1 chain matched
31.8%98.4%1e-211–243
PDB 6UDS | dpdb_k5jbtj44Acinetobacter baumannii · 1 chain matched
34.2%97.6%5e-303–243
PDB 4N5N | dpdb_6p4sxpnyRalstonia eutropha · 1 chain matched
34.8%94.7%9e-2610–243
PDB 4N5M | dpdb_6pm9x1iqRalstonia eutropha · 1 chain matched
34.8%94.7%9e-2610–243
PDB 4N5L | dpdb_bxnpytxjRalstonia eutropha · 1 chain matched
34.8%94.7%9e-2610–243
PDB 6TQ5 | dpdb_p726aayuStarmerella magnoliae · 1 chain matched
32.3%95.1%1e-2112–246
PDB 4YQY | dpdb_2p9ikxndSulfitobacter sp. NAS-14.1 · 1 chain matched
33.7%97.6%2e-175–245
PDB 5JLA | dpdb_2frtn6elBurkholderia xenovorans (strain LB400) · 1 chain matched
35.2%96%7e-269–245
PDB 4CR6 | dpdb_nenrixt0FLAVOBACTERIUM SP. 141-8 · 1 chain matched
33.2%98%9e-282–243
PDB 2C07 | dpdb_ih2ecfqjPLASMODIUM FALCIPARUM · 1 chain matched
36%95.5%2e-388–243
PDB 6ZZO | dpdb_jt1q1d4kPsychrobacter arcticus · 1 chain matched
31.5%96.4%8e-237–244
PDB 6ZZP | dpdb_q1tjgl4vPsychrobacter arcticus · 1 chain matched
31.5%96.4%8e-237–244
PDB 7CAW | dpdb_6ibbvum3Acinetobacter baumannii · 1 chain matched
31.8%94.7%8e-2510–243
PDB 7CAX | dpdb_xmgykgl3Acinetobacter baumannii · 1 chain matched
31.8%94.7%8e-2510–243