Deposited model

PDB 6EO6|dpdb_h6idz33b

Deposited model

X-ray structure of the complex between human alpha-thrombin and modified 15-mer DNA aptamer containing 5-(3-(2-(1H-indol-3-yl)acetamide-N-yl)-1-propen-1-yl)-2'-deoxyuridine residue

Program
REFMAC 5.8.0158
Model type
Deposited
Purpose
Reference
Authors
Dolot, R.M., Nawrot, B., Yang, X.
Atoms
3,230
Residues
303
Protein chains
3
Unmodeled fraction
2.26%
Ligands
0G6, K, NA, NAG

Evaluations

R-work
0.145
R-free
0.168
Clashscore
5.7

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
GA63A - TBA MODIFIED APTAMER15——
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Prothrombin36—
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Prothrombin259—

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations