Dynamic PDB
Log in

Rerefined model

PDB 6SYF|dpdb_j1u8d6gi

Rerefined model

Human Ubc9 with covalent isopeptide ligand

Program
PHENIX 2.0_5824
Model type
Multiconformer
Purpose
Refinement
Atoms
5,923
Residues
658
Protein chains
12
Alternate-location fraction
1.06%
Ligand
ACE

Evaluations

R-work
0.247
R-free
0.304
Clashscore
8.8

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
SUMO-conjugating enzyme UBC9158
  • MutationsK48A K49A E54A C138A
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
ACE-LEU-ARG-LEU-ARG-GLY-CYS7——
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
ACE-ILE-LYS-GLN-GLU5——

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations