qFit model

PDB 2BNR|dpdb_k5lxw57z

qFit model

Structural and kinetic basis for heightened immunogenicity of T cell vaccines

Program: Phenix 2.0_5824
Model type: Multiconformer
Purpose: Model Building
Atoms: 10,349

Residues: 829
Protein chains: 5
Alternate-location fraction: 44.27%

Evaluations

R-work

0.179

R-free

0.220

Clashscore

—

Macromolecules

The same in every model of this entry.

Entity 1
Molecule	Chains	Length	Organism	UniProt	Details
HLA CLASS I HISTOCOMPATIBILITY ANTIGEN		276	Homo sapiens9606	P04439SIFTS · 2026_03	ConstructEXTRACELLULAR ALPHA-1, -2, -3, RESIDUES 25-300

Entity 2
Molecule	Chains	Length	Organism	UniProt	Details
BETA-2-MICROGLOBULIN		100	Homo sapiens9606	P61769SIFTS · 2026_03	ConstructBETA-2-MICROGLOBULIN, RESIDUES 21-119

Entity 3
Molecule	Chains	Length	Organism	UniProt	Details
SYNTHETIC PEPTIDE		9	Homo sapiens9606	P78358SIFTS · 2026_03	—

Entity 4
Molecule	Chains	Length	Organism	UniProt	Details
T-CELL RECEPTOR ALPHA CHAIN V REGION		203	Homo sapiens9606	A0A0B4J279SIFTS · 2026_03 P01848SIFTS · 2026_03	—

Entity 5
Molecule	Chains	Length	Organism	UniProt	Details
T-CELL RECEPTOR BETA CHAIN C REGION		241	Homo sapiens9606	A0A0K0K1A5SIFTS · 2026_03 P01850SIFTS · 2026_03	ConstructEXTRACELLULAR, RESIDUES 1-130

Data

L0 Raw

L1 Processed

L2 Models

L3 Evaluations