Deposited model

PDB 4D6S|dpdb_kz3rkroa

Deposited model

crystal structure of human JMJD2D in complex with N-OXALYLGLYCINE and bound 5,6-Dimethylbenzimidazole

Program
PHENIX (PHENIX.REFINE)
Model type
Deposited
Purpose
Reference
Authors
Krojer, T., Vollmar, M., Bradley, A., Crawley, L., Szykowska, A., Burgess-Brown, N., Gileadi, C., Johansson, C., Oppermann, U., Bountra, C., Arrowsmith, C.H., Edwards, A., von Delft, F.
Atoms
3,288
Residues
327
Protein chains
1
Unmodeled fraction
4.66%
Ligands
NI, OGA, ZN

Evaluations

R-work
0.139
R-free
0.164
Clashscore
4.8

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
LYSINE-SPECIFIC DEMETHYLASE 4D343
  • ConstructJUMONJI DOMAIN, RESIDUES 1-342

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations