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Rerefined model

PDB 7SA2|dpdb_m3xlrxjn

Rerefined model

SARS-CoV-2 spike-derived peptide S1060-1068 (VVFLHVTYV) presented by HLA-A*02:01

Program
PHENIX 2.0_5824
Model type
Multiconformer
Purpose
Refinement
Atoms
3,902
Residues
386
Protein chains
3
Alternate-location fraction
7.51%
Ligands
CD, NA

Evaluations

R-work
0.155
R-free
0.194
Clashscore
7.3

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
MHC class I antigen278—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Beta-2-microglobulin100
  • ConstructUNP residues 21-119
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Spike protein S2' peptide VVFLHVTYV9
  • Severe acute respiratory syndrome coronavirus 22697049
  • ConstructUNP residues 1060-1068

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations