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Ensemble refinement model

PDB 7AHZ|dpdb_mtlib0jn

Ensemble refinement model

Crystal structure of Western clawed frog MDM2 RING domain homodimer bound to UbcH5B-Ub

Program
PHENIX 2.0_5824
Model type
Ensemble
Purpose
Refinement
Atoms
463,193
Residues
1,122
Protein chains
12
Alternate-location fraction
0%
Ligands
CL, ZN

Evaluations

R-work
0.184
R-free
0.222
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
E3 ubiquitin-protein ligase Mdm271
  • Xenopus tropicalis8364
—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast)147
  • Xenopus tropicalis8364
  • MutationsS22R C85K
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Polyubiquitin-B81—

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations