Ensemble refinement model

PDB 4HON|dpdb_oru8s6go

Ensemble refinement model

Crystal structure of human JMJD2D/KDM4D in complex with an H3K9me3 peptide and 2-oxoglutarate

Program
PHENIX 1.21.2_5419
Model type
Ensemble
Purpose
Refinement
Atoms
408,825
Residues
675
Protein chains
4
Alternate-location fraction
0%
Ligands
AKG, M3L, NI, NO3, PDO, SCN, ZN

Evaluations

R-work
0.156
R-free
0.186
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Lysine-specific demethylase 4D330
  • ConstructUNP Residues 12-341
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Histone H3 Peptide10—

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations