qFit model

PDB 8A67|dpdb_rl5s7ftc

qFit model

Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with matured synthetic nanobody NbSL3.3Q (3rd generation)

Program
Phenix 2.0_5824
Model type
Multiconformer
Purpose
Model Building
Atoms
11,485
Residues
698
Protein chains
8
Alternate-location fraction
79.08%
Ligands
CL, GOL, IPA, NA, ZN

Evaluations

R-work
0.168
R-free
0.218
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Polyubiquitin-B72—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Polyubiquitin-B76
  • MutationsK48R K63R
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Synthetic Nanobody NbSL3.3Q148——

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations