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Ensemble refinement model

PDB 7UVA|dpdb_suyxgwe8

Ensemble refinement model

Crystal structure of KDM2A histone demethylase catalytic domain in complex with an H3C36 peptide modified by UNC8015

Program
PHENIX 1.21.2_5419
Model type
Ensemble
Purpose
Refinement
Atoms
469,648
Residues
811
Protein chains
6
Alternate-location fraction
0%
Ligands
FE, OH0

Evaluations

R-work
0.172
R-free
0.222
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Lysine-specific demethylase 2A330
  • ConstructUNP residues 36-364
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Lysine-specific demethylase 2A69
  • ConstructUNP residues 450-517
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Histone H3.213
  • ConstructUNP residues 30-42
  • MutationK36C

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations