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Rerefined model

PDB 3VRV|dpdb_u4eswbdp

Rerefined model

VDR ligand binding domain in complex with 2-Methylidene-26,27-dimethyl-19,24-dinor-1alpha,25-dihydroxyvitamin D3

Program
PHENIX 2.0_5824
Model type
Multiconformer
Purpose
Refinement
Atoms
2,232
Residues
247
Protein chains
2
Alternate-location fraction
0%
Ligand
YSD

Evaluations

R-work
0.188
R-free
0.232
Clashscore
5.2

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Vitamin D3 receptor271
  • ConstructLigand binding domain, residues 116-423
  • Mutationsdeletion mutant, residues 165-211
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
13-meric peptide from Mediator of RNA polymerase II transcription subunit 113
  • ConstructDRIP205 NR2 BOX peptide, UNP residues 640-652

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations