Ensemble refinement model

PDB 4WJ5|dpdb_vmwo777v

Ensemble refinement model

Structure of HLA-A2 in complex with an altered peptide ligands based on Mart-1 variant epitope

Program
PHENIX 2.0_5824
Model type
Ensemble
Purpose
Refinement
Atoms
458,797
Residues
764
Protein chains
6
Alternate-location fraction
0%
Ligands
GOL, GRN, LPH, NVA

Evaluations

R-work
0.174
R-free
0.210
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
HLA class I histocompatibility antigen, A-2 alpha chain275—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Beta-2-microglobulin100
  • ConstructUNP residues 21-119
  • MutationsMethionine residue is introduced as start codon
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Melanoma antigen recognized by T-cells 110—

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations