Dynamic PDB
Log in

Rerefined model

PDB 2P5E|dpdb_wruyi224

Rerefined model

Crystal Structures of High Affinity Human T-Cell Receptors Bound to pMHC Reveal Native Diagonal Binding Geometry

Program
PHENIX 2.0_5824
Model type
Multiconformer
Purpose
Refinement
Atoms
7,477
Residues
820
Protein chains
5
Alternate-location fraction
1.34%
Ligands
EPE, GOL, IPA, MG, SO4

Evaluations

R-work
0.194
R-free
0.244
Clashscore
7.0

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
HLA class I histocompatibility antigen, A-2 alpha chain276
  • ConstructEXTRACELLULAR DOMAINS ALPHA 1, ALPHA2 AND ALPHA3, RESIDUES 25-299
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Beta-2-microglobulin100
  • ConstructBETA-2 MICROGLOBULIN, RESIDUES 21-119
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Cancer/testis antigen 1B9
  • ConstructRESIDUES 157-165
Entity 4
MoleculeChainsLengthOrganismUniProtDetails
T-Cell Receptor, Alpha Chain195—
Entity 5
MoleculeChainsLengthOrganismUniProtDetails
Hypothetical protein242—

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations