Ensemble refinement model

PDB 6YW4|dpdb_zb4f3vtu

Ensemble refinement model

HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with N-oxalylglycine (NOG) and a RaPID-derived silent allosteric cyclic peptide 3C (14-mer)

Program
PHENIX 2.0_5824
Model type
Ensemble
Purpose
Refinement
Atoms
76,128
Residues
222
Protein chains
2
Alternate-location fraction
0%
Ligands
48V, DTY, MN, OGA, SO4

Evaluations

R-work
0.189
R-free
0.208
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Egl nine homolog 1233
  • MutationsC201A/R398A
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
PHD2-SPECIFIC RaPID CYCLIC PEPTIDE 3C (14-MER)14——

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations