Deposited model

PDB 4RZ8|dpdb_1x810dn7

Deposited model

Crystal structure of HIV-1 gp120 core in complex with NBD-11021, a small molecule CD4-antagonist

Program
PHENIX (phenix.refine
Model type
Deposited
Purpose
Reference
Authors
Kwon, Y.D., Debnath, A.K., Kwong, P.D.
Atoms
12,011
Residues
1,351
Protein chains
4
Unmodeled fraction
4.32%
Ligand
NAG

Evaluations

R-work
0.227
R-free
0.243
Clashscore
11.9

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Envelope glycoprotein gp120353
  • Human immunodeficiency virus 111676
  • Human immunodeficiency virus 111676
  • Human immunodeficiency virus 111676
  • ConstructUNP residues 43-122, 201-303, 325-486
  • MutationsV1V2 and V3 deletion, H375S

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations