Rerefined model

PDB 6HBY|dpdb_b1521873

Rerefined model

HLA class II peptide flanking residues tune the immunogenicity of a human tumor-derived epitope

Program
PHENIX 2.0_5824
Model type
Multiconformer
Purpose
Refinement
Atoms
6,791
Residues
777
Protein chains
6
Alternate-location fraction
0.26%
Ligands
EDO, PO4

Evaluations

R-work
0.203
R-free
0.248
Clashscore
4.1

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
HLA class II histocompatibility antigen, DR alpha chain178—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
HLA class II histocompatibility antigen, DRB1-1 beta chain191—
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
ARRPPLAELAALNLSGSRL 5T4 tumour epitope19—
Entity 4
MoleculeChainsLengthOrganismUniProtDetails
HLA class II histocompatibility antigen, DR alpha chain180—

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations