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qFit model

PDB 6HBY|dpdb_b1521873

qFit model

HLA class II peptide flanking residues tune the immunogenicity of a human tumor-derived epitope

Program
Phenix 2.0_5824
Model type
Multiconformer
Purpose
Model Building
Atoms
10,592
Residues
777
Protein chains
6
Alternate-location fraction
49.16%
Ligands
EDO, PO4

Evaluations

R-work
0.197
R-free
0.242
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
HLA class II histocompatibility antigen, DR alpha chain178—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
HLA class II histocompatibility antigen, DRB1-1 beta chain191—
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
ARRPPLAELAALNLSGSRL 5T4 tumour epitope19—
Entity 4
MoleculeChainsLengthOrganismUniProtDetails
HLA class II histocompatibility antigen, DR alpha chain180—

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations