Rerefined model

PDB 7NBB|dpdb_erpjpi8l

Rerefined model

Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with synthetic nanobody NbSL3

Program
PHENIX 2.0_5824
Model type
Multiconformer
Purpose
Refinement
Atoms
6,192
Residues
683
Protein chains
8
Alternate-location fraction
2.49%
Ligands
CL, GOL, MG, NA

Evaluations

R-work
0.183
R-free
0.224
Clashscore
8.4

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Polyubiquitin-B72—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Polyubiquitin-B76
  • MutationsK48R K63R
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Synthetic nanobody NbSL3129——

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations