Deposited model

PDB 8A67|dpdb_rl5s7ftc

Deposited model

Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with matured synthetic nanobody NbSL3.3Q (3rd generation)

Program
PHENIX 1.20.1_4487
Model type
Deposited
Purpose
Reference
Authors
Lange, S.M., Kulathu, Y.
Atoms
5,993
Residues
698
Protein chains
8
Unmodeled fraction
6.18%
Ligands
IPA, NA, ZN

Evaluations

R-work
0.186
R-free
0.245
Clashscore
4.2

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Polyubiquitin-B72—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Polyubiquitin-B76
  • MutationsK48R K63R
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Synthetic Nanobody NbSL3.3Q148——

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations