Dynamic PDB
Log in

Rerefined model

PDB 5XPN|dpdb_us2pniw7

Rerefined model

Crystal structure of VDR-LBD complexed with 25RS-(hydroxyphenyl)-25-methoxy-2-methylidene-19,26,27-trinor-1-hydroxyvitamin D3

Program
PHENIX 2.0_5824
Model type
Multiconformer
Purpose
Refinement
Atoms
2,254
Residues
250
Protein chains
2
Alternate-location fraction
0%
Ligands
8BO, 9RO

Evaluations

R-work
0.195
R-free
0.242
Clashscore
6.9

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Vitamin D3 receptor271
  • ConstructUNP residues 116-423
  • Mutationsdeletion mutant(residues 165-211)
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Mediator of RNA polymerase II transcription subunit 113
  • ConstructUNP residues 640-652

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations