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Ensemble refinement model

PDB 5XPN|dpdb_us2pniw7

Ensemble refinement model

Crystal structure of VDR-LBD complexed with 25RS-(hydroxyphenyl)-25-methoxy-2-methylidene-19,26,27-trinor-1-hydroxyvitamin D3

Program
PHENIX phenix.ensemble_refinement
Model type
Ensemble
Purpose
Refinement
Atoms
73,333
Residues
250
Protein chains
2
Alternate-location fraction
0%
Ligands
8BO, 9RO

Evaluations

R-work
0.212
R-free
0.248
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Vitamin D3 receptor271
  • ConstructUNP residues 116-423
  • Mutationsdeletion mutant(residues 165-211)
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Mediator of RNA polymerase II transcription subunit 113
  • ConstructUNP residues 640-652

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations