Deposited model

PDB 6Y9H|dpdb_uz3ygwvp

Deposited model

Thrombin in complex with D-Phe-Pro-m-Trifluoromethylbenzylamide derivative (phe2)

Program
PHENIX 1.14_3260
Model type
Deposited
Purpose
Reference
Authors
Sandner, A., Heine, A., Klebe, G., Abazi, N.
Atoms
2,771
Residues
292
Protein chains
4
Unmodeled fraction
5.81%
Ligands
NA, NAG

Evaluations

R-work
0.138
R-free
0.170
Clashscore
1.2

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Prothrombin36—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Prothrombin259—
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Hirudin variant-212
  • Hirudo medicinalis6421
—
Entity 4
MoleculeChainsLengthOrganismUniProtDetails
D-Phe-Pro-m-Trifluoromethylbenzylamide derivative (phe2)3——

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations