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qFit model

PDB 5AF9|dpdb_wtxbsp3i

qFit model

Thrombin in complex with 4-Methoxy-N-(2-pyridinyl)benzamide

Program
Phenix 2.0_5824
Model type
Multiconformer
Purpose
Model Building
Atoms
6,580
Residues
251
Protein chains
3
Alternate-location fraction
93.23%
Ligands
DMS, EDO, GOL, NA, NAG, PO4, SJR, TYS

Evaluations

R-work
0.166
R-free
0.188
Clashscore
—

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
THROMBIN HEAVY CHAIN258
  • ConstructTHROMBIN HEAVY CHAIN, UNP RESIDUES 364-621
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
HIRUDIN VARIANT-212
  • Hirudo medicinalis6421
  • ConstructUNP RESIDUES 61-72
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
THROMBIN LIGHT CHAIN29
  • ConstructTHROMBIN LIGHT CHAIN, UNP RESIDUES 333-361

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations