Deposited model

PDB 7NBB|dpdb_erpjpi8l

Deposited model

Branched Lys48- and Lys63-linked tri-ubiquitin (K48-K63-Ub3) in complex with synthetic nanobody NbSL3

Program
PHENIX 1.19rc4_4035
Model type
Deposited
Purpose
Reference
Authors
Lange, S.M., Kulathu, Y.
Atoms
6,134
Residues
683
Protein chains
8
Unmodeled fraction
3.26%
Ligands
GOL, MG, NA

Evaluations

R-work
0.174
R-free
0.212
Clashscore
4.5

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
Polyubiquitin-B72—
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
Polyubiquitin-B76
  • MutationsK48R K63R
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
Synthetic nanobody NbSL3129——

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations