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Deposited model

PDB 5AF9|dpdb_wtxbsp3i

Deposited model

Thrombin in complex with 4-Methoxy-N-(2-pyridinyl)benzamide

Program
PHENIX (PHENIX.REFINE)
Model type
Deposited
Purpose
Reference
Authors
Ruehmann, E., Heine, A., Klebe, G.
Atoms
2,775
Residues
289
Protein chains
3
Unmodeled fraction
3.34%
Ligands
NA, NAG

Evaluations

R-work
0.121
R-free
0.137
Clashscore
2.6

Macromolecules

The same in every model of this entry.

Entity 1
MoleculeChainsLengthOrganismUniProtDetails
THROMBIN HEAVY CHAIN258
  • ConstructTHROMBIN HEAVY CHAIN, UNP RESIDUES 364-621
Entity 2
MoleculeChainsLengthOrganismUniProtDetails
HIRUDIN VARIANT-212
  • Hirudo medicinalis6421
  • ConstructUNP RESIDUES 61-72
Entity 3
MoleculeChainsLengthOrganismUniProtDetails
THROMBIN LIGHT CHAIN29
  • ConstructTHROMBIN LIGHT CHAIN, UNP RESIDUES 333-361

Data

L0 Raw
L1 Processed
L2 Models
L3 Evaluations